DOE PAGES title logo U.S. Department of Energy
Office of Scientific and Technical Information
  1. Toward engineering E. coli with an autoregulatory system for lignin valorization

    Significance Lignin valorization is critical for economic viability of future biorefineries but is hindered due to the challenges of engineered bio-chassis such as the slow kinetics of substrate uptake, aromatics toxicity, and cost. Here, an autoregulatory system involving a vanillin autoinducible promoter is demonstrated with an aromatics transporter in Escherichia coli that is induced by lignin-derived aromatics and simultaneously converted to value-added platform chemical with diverse applications. In addition to alleviating toxicity, the engineered E. coli strain eliminates the need for an external inducer such as isopropyl β- d -1-thiogalactopyranoside during fermentation, thereby significantly reducing the process cost. This studymore » demonstrates an autoregulatory system for aromatics bioconversion and serves as a platform for future strain development for lignin valorization.« less
  2. Bioconversion of distillers’ grains hydrolysates to advanced biofuels by an Escherichia coli co-culture

    Here, the first generation bioethanol production utilizes the starch fraction of maize, which accounts for approximately 60% of the ash-free dry weight of the grain. Scale-up of this technology for fuels applications has resulted in a massive supply of distillers’ grains with solubles (DGS) coproduct, which is rich in cellulosic polysaccharides and protein. It was surmised that DGS would be rapidly adopted for animal feed applications, however, this has not been observed based on inconsistency of the product stream and other logistics-related risks, especially toxigenic contaminants. Therefore, efficient valorization of DGS for production of petroleum displacing products will significantly improvemore » the techno-economic feasibility and net energy return of the established starch bioethanol process. In this study, we demonstrate ‘one-pot’ bioconversion of the protein and carbohydrate fractions of a DGS hydrolysate into C4 and C5 fusel alcohols through development of a microbial consortium incorporating two engineered Escherichia coli biocatalyst strains.« less
  3. Lignin Valorization: Two Hybrid Biochemical Routes for the Conversion of Polymeric Lignin into Value-added Chemicals

    Naturally, many aerobic organisms degrade lignin-derived aromatics through conserved intermediates including protocatechuate and catechol. Employing this microbial approach offers a potential solution for valorizing lignin into valuable chemicals for a potential lignocellulosic biorefinery and enabling bioeconomy. In this study, two hybrid biochemical routes combining lignin chemical depolymerization, plant metabolic engineering, and synthetic pathway reconstruction were demonstrated for valorizing lignin into value-added products. In the biochemical route 1, alkali lignin was chemically depolymerized into vanillin and syringate as major products, which were further bio-converted into cis, cis-muconic acid (ccMA) and pyrogallol, respectively, using engineered Escherichia coli strains. In the second biochemicalmore » route, the shikimate pathway of Tobacco plant was engineered to accumulate protocatechuate (PCA) as a soluble intermediate compound. The PCA extracted from the engineered Tobacco was further converted into ccMA using the engineered E. coli strain. This study reports a direct process for converting lignin into ccMA and pyrogallol as value-added chemicals, and more importantly demonstrates benign methods for valorization of polymeric lignin that is inherently heterogeneous and recalcitrant. Our approach also validates the promising combination of plant engineering with microbial chassis development for the production of value added and speciality chemicals.« less
  4. Cofactor engineering of ketol-acid reductoisomerase (IlvC) and alcohol dehydrogenase (YqhD) improves the fusel alcohol yield in algal protein anaerobic fermentation

    Recently the feasibility of conversion of algal protein to mixed alcohols has been demonstrated with an engineered E.coli strain, enabling comprehensive utilization of the biomass for biofuel applications. However, the yield and titers of mixed alcohol production must be improved for market adoption. A major limiting factor for achieving the necessary yield and titer improvements is cofactor imbalance during the fermentation of algal protein. To resolve this problem, a directed evolution approach was applied to modify the cofactor specificity of two key enzymes (IlvC and YqhD) from NADPH to NADH in the mixed alcohol metabolic pathway. Using high throughput screening,more » more than 20 YqhD mutants were identified to show activity on NADH as a cofactor. Of these 20 mutants, the top five of YqhD mutants were selected for combination with two IlvC mutants with NADH as a cofactor for the modification of the protein conversion strain. The combination of the IlvC and YqhD mutants yielded a refined E.coli strain, subtype AY3, with increased fusel alcohol yield of ~60% compared to wild type under anaerobic fermentation on amino acid mixtures. When applied to real algal protein hydrolysates, the strain AY3 produced 100% and 38% more total mixed alcohols than the wild type strain on two different algal hydrolysates, respectively. The results indicate that cofactor engineering is a promising approach to improve the feasibility of bioconversion of algal protein into mixed alcohols as advanced biofuels.« less
  5. One-pot bioconversion of algae biomass into terpenes for advanced biofuels and bioproducts

    In this study, rising demand for transportation fuels, diminishing reserved of fossil oil, and the concerns with fossil fuel derived environmental pollution as well as the green-house gas emission derived climate change have resulted in the compelling need for alternative, sustainable new energy sources(1). Algae-based biofuels have been considered one of the promising alternatives to fossil fuels as they can overcome some of these issues (2-4). The current state-of-art of algal biofuel technologies have primarily focused on biodiesel production through prompting high algal lipid yields under the nutrient stress conditions. There are less interests of using algae-based carbohydrate and proteinsmore » as carbon sources for the fermentative production of liquid fuel compounds or other high-value bioproducts(5-7).« less
  6. Decoding how a soil bacterium extracts building blocks and metabolic energy from ligninolysis provides road map for lignin valorization

    Significance Lignin is the only renewable and abundant polymer on the earth with aromatic units as its building blocks; however, it remains as an untapped resource. The current approach to making the biofuel industry cost competitive with the petroleum industry is to derive more value from the lignin. In this study we combined the unique approaches of both chemical engineering and biology to gain a deeper understanding of the metabolism of a soil bacterium, Sphingobium sp. SYK-6, that enables it to survive on lignin-derived monomers and oligomers. Understanding the central metabolism of SYK-6 will enable researchers to redesign the metabolicmore » pathways of Sphingobium sp. SYK-6 more effectively to provide a renewable route for the production of products currently sourced from petrochemicals.« less
  7. Rapid discovery and functional characterization of terpene synthases from four endophytic xylariaceae

    Endophytic fungi are ubiquitous plant endosymbionts that establish complex and poorly understood relationships with their host organisms. Many endophytic fungi are known to produce a wide spectrum of volatile organic compounds (VOCs) with potential energy applications, which have been described as "mycodiesel". Many of these mycodiesel hydrocarbons are terpenes, a chemically diverse class of compounds produced by many plants, fungi, and bacteria. Due to their high energy densities, terpenes, such as pinene and bisabolene, are actively being investigated as potential "drop-in" biofuels for replacing diesel and aviation fuel. In this study, we rapidly discovered and characterized 26 terpene synthases (TPSs)more » derived from four endophytic fungi known to produce mycodiesel hydrocarbons. The TPS genes were expressed in an E. coli strain harboring a heterologous mevalonate pathway designed to enhance terpene production, and their product profiles were determined using Solid Phase Micro-Extraction (SPME) and GC-MS. Lastly, out of the 26 TPS’s profiled, 12 TPS’s were functional, with the majority of them exhibiting both monoterpene and sesquiterpene synthase activity.« less

Search for:
All Records
Creator / Author
"Wu, Weihua"

Refine by:
Article Type
Availability
Journal
Creator / Author
Publication Date
Research Organization